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Protege ViewName Owl file Ontology website
AKT http://www.aktors.org/publications/ontology/
Biositemap   http://bioportal.bioontology.org/visualize/40656
Biomedical Resource Ontology http://bioportal.bioontology.org/ontologies/39977
DOLCE http://www.loa‐cnr.it/DOLCE.html
DOLCEnew http://www.loa‐cnr.it/DOLCE.html
DUBLINE CORE http://dublincore.org/documents/dcmi‐terms/
FOAF http://xmlns.com/foaf/spec/
BIBO http://purl.org/ontology/bibo/
Information Artifact Ontology (IAO) http://code.google.com/p/information‐artifact‐ontology/
NEW ONTOLOGY FOR ARPFO http://vocab.ox.ac.uk/
NIF https://confluence.crbs.ucsd.edu/display/NIF/NIF+Ontologies+and+Terminologies
NIFnew http://bcc-dev-web.nbirn.net/nif/nif_vocabularies.shtm
Ontology for Biomedical Investigations (OBI) http://obiontology.org/page/Main_Page
Ontology for Biomedical Investigations (OBI updated 100216)

http://obi-ontology.org/page/Main_Page

RELATIONSHIP http://ontoware.org/frs/?group_id=11&release_id=70 http://vocab.org/relationship/.html
SIOC http://rdfs.org/sioc/spec/
SUMO http://virtual.cvut.cz/kifb/en/toc/229.html
Semantic Web Applications in Neuromedicine (SWAN) http://www.w3.org/TR/hcls‐swan/
Semantic Web Applications in Neuromedicine (SWAN) updated on 2010-2-18 http://swan.mindinformatics.org/ontology.html#
Semantic Web Applications in Neuromedicine (SWAN) Agents http://swan.mindinformatics.org/ontology.html#
Semantic Web Applications in Neuromedicine (SWAN) Scientific Discourse Ontology http://swan.mindinformatics.org/ontology.html#
Semantic Web Applications in Neuromedicine (SWAN) Qualifiers http://swan.mindinformatics.org/ontology.html#
Semantic Web Applications in Neuromedicine (SWAN) Life Science Entities http://swan.mindinformatics.org/ontology.html#
Semantic Web Applications in Neuromedicine (SWAN) Citations http://swan.mindinformatics.org/ontology.html#
SWRC http://ontoware.org/frs/?group_id=11&release_id=70
UMBEL   http://umbel.org/technical_documentation.html
Software Ontology (SWO) http://bioportal.bioontology.org/ontologies/42036
VIVO 0.9 release http://swl.slis.indiana.edu/VIVO/
Eaglei Team Latest ontology updated on 2010 Feb., 18 https://confluence.cornell.edu/display/u24/Home
Cito Ontology   http://imageweb.zoo.ox.ac.uk/pub/2009/citobase/cito-20091124-1.4/cito-content/owldoc/
Representing vCard Objects in RDF   http://www.w3.org/Submission/2010/SUBM-vcard-rdf-20100120/
Basic Formal Ontology(BFO) http://www.ifomis.org/bfo
MeSH http://www.nlm.nih.gov/mesh/meshhome.html
People Finder Interchange Format (PFIF) http://zesty.ca/pfif/1.2/
sahana-person http://www.sahana.lk
ORCID http://www.orcid.org/
VIVO core 1.0 release http://vivoweb.org/download
SKE ontology (VIVO instance in China) http://ske.las.ac.cn/
Similarity Ontology http://purl.org/ontology/similarity/
An organization ontology http://www.epimorphics.com/public/vocabulary/org.html
PROTON ONTOLOGY http://proton.semanticweb.org/
Personal Information Management (PIM) contact ontology click first icon in this line to see document
Information Service Ontology http://sourceforge.net/projects/infoserviceonto/
Description of a Project (DOAP) vocabulary http://trac.usefulinc.com/doap/wiki
RDF Calendar (ical) http://www.w3.org/2002/12/cal/
VIVO release 1.1 http://vivoweb.org/download
Eagle_I ontology released on 2010-7-25 related classes and properties for roles / mapping between VIVO and Eagle-I ontology on organizations http://code.google.com/p/eagle-i/downloads/list
Eagle_I ontology released on 2010-9-25 http://code.google.com/p/eagle-i/downloads/list
Other online ontologies repository
 Name Website
ontology repository TONES project http://owl.cs.manchester.ac.uk/repository/
ESW Wiki VocabularyMarket http://esw.w3.org/topic/VocabularyMarket
ontology metadata vocabulary http://omv.ontoware.org/2005/05/ontology
NCBO Bioportalhttp://bioportal.bioontology.org/
ORATE (Ontology Repository for Assistive Technologies) http://ontologies.informatik.uni-bremen.de/
Sweet Tools http://www.mkbergman.com/new-version-sweet-tools-sem-web/
Ontology Design Patterns.org http://ontologydesignpatterns.org/wiki/Main_Page
SchemaWeb http://www.schemaweb.info/schema/BrowseSchema.aspx
The Open Biological and Biomedical Ontologies http://www.obofoundry.org/
An organization ontology survey http://www.epimorphics.com/web/wiki/organization-ontology-survey
Bioportal v. 2.5 http://bioportal.bioontology.org/
EBI ontologies tools http://www.ebi.ac.uk/efo/tools
Another ontology repository collected by SLIS, IU (for course use) http://info.slis.indiana.edu/~dingying/Teaching/S604/OntologyList.html

Ontology reporting examples

  Name Website
For Event Ontology http://motools.sourceforge.net/event/event.html
Owldoc  http://www.co-ode.org/downloads/owldoc/
For SWAN Ontology  http://www.w3.org/TR/hcls-swan/

 

Indiana University Bloomington, SLIS

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